British Museum | Museum of Modern Art | Metropolitan Museum of Art | American Museum of Natural History | Victoria and Albert Museum | Natural History Museum | San Francisco Museum of Modern Art | Honolulu Museum of Art | museum | Whitney Museum of American Art | Museum of Fine Arts, Boston | Los Angeles County Museum of Art | Solomon R. Guggenheim Museum | National Air and Space Museum | Brooklyn Museum | National Baseball Hall of Fame and Museum | Hermitage Museum | National Museum of Racing and Hall of Fame | Museum of Contemporary Art | Field Museum of Natural History | Philadelphia Museum of Art | Imperial War Museum | Smithsonian American Art Museum | National Museum | National Museum of Natural History | Museum of Fine Arts, Houston | Denver Art Museum | Cleveland Museum of Art | Museum of Contemporary Art, Los Angeles | National Maritime Museum |
Genzken's work is included in the collections of many institutions internationally, including the Museum of Modern Art, New York; Carnegie Museum of Art, Pittsburgh; the Generali Foundation, Vienna; the Hirshhorn Museum and Sculpture Garden, Washington, D.C.; the Kemper Art Museum, St. Louis; the Museum Ludwig, Cologne; the Museum Frieder Burda, Baden-Baden; and the Van Abbemuseum, Eindhoven.
A major art collector, in 2004 he opened Museum Frieder Burda in Baden-Baden, in a €20 million building designed by architect Richard Meier.