He was criticised for embellishing the facts in the interests of the narrative, and was met with hostility by General Sir Thomas Blamey for his "irregular methods and indiscreet utterances" during WWII.
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Although he was successful, Allen nevertheless came under what many consider unfair criticism from the Allied commander in the South West Pacific Area, U.S. General Douglas MacArthur and the Allied land forces commander, the Australian General Thomas Blamey, for moving too slowly in pursuit of the Japanese across the Owen Stanley Ranges.
In 1943, the Australian Army’s Colonel Alfred Conlon, who had previously chaired Prime Minister John Curtin's committee on national morale, was assigned to the staff of the Army’s commander-in-chief, General Sir Thomas Blamey.
On 27 October, General Sir Thomas Blamey relieved Allen, replacing him with Major General George Alan Vasey, an officer that Eather distrusted, holding him responsible for the destruction of the 2/1st on Crete.