It has been found in Bongolava, and between Anjiamangirana I and Tsingy de Namoroka Strict Nature Reserve (Namoroka National Park or Parc National de Namoroka).
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Brookesia bonsi is endemic to Tsingy de Namoroka Strict Nature Reserve (Namoroka National Park; Reserve naturelle no. 8 du Tsingy de Namoroka) in Soalala District, Mahajanga Province, northern Madagascar.