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In 1462 he became archdeacon of Würzburg, not, however, without encountering violent opposition from the Bishop of Würzburg, who hated Eyb as a partisan of the Hohenzollern Margrave, Albrecht Achilles.
His nephew, Georg Karl von Fechenbach, the Prince-Bishop of Würzburg, consecrated him as a bishop on 16 August 1795 and he took office.
Having finished his apprenticeship, he worked, together with his father, at the residence of the Prince-Bishop of Würzburg and then, until the mid-1750s, at the residence of the Prince-Bishop of Speyer in Bruchsal.
Increasing differences with the convent led to his resignation in 1506, when he decided to take up the offer of the Bishop of Würzburg, Lorenz von Bibra (bishop from 1495 to 1519), to become the abbot of St. James's Abbey, the Schottenkloster in Würzburg.
Alphonse Lhotsky in a handwritten note suggested the late 13th century and identified the scribe as a secretary to the bishop of Würzburg.
Wilhelm was a member of the aristocratic Franconian von Bibra family which among its members were Wilhelm’s half brother, Lorenz von Bibra Prince-Bishop of Würzburg, Duke in Franconia, Conrad von Bibra, Prince-Bishop of Würzburg, Duke in Franconia (1490-1544), Heinrich von Bibra, Prince-Bishop, Prince-Abbot of Fulda (1711-1788) and Ernst von Bibra (1806-1878), naturalist and author.