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Watkins' compositions include a full-length opera, The Juniper Tree, premiered at the Munich Biennale in April 1997, and given its UK premiere at the Almeida festival in July of that year by the London Sinfonietta conducted by Markus Stenz.
Her second opera, L'Absence, to her own libretto after Edmond Jabès was premiered at the 2012 Munich Biennale.
In 2010 his opera Tilt, on a libretto by Roland Quitt after the diary of Sir Walter Raleigh, was performed as part of the triple bill entitled Amazonas (with Der Einsturz des Himmels and In Erwartung) at the Munich Biennale, also in São Paulo and Rotterdam.