In The Atrocity Archives, the Iraqi Intelligence Service was said to be collaborating with Yusuf al-Qaradawi on raising shoggoths for use in combating the West.
He also mentions that when he began writing the series in 1999, he chose as villains "an obscure but fanatical and unpleasant gang who might, conceivably, be planning an atrocity on American soil"; but that by the time the novel was to be published in late 2001, Al-Qaeda was no longer obscure, so he chose a different group to use in the novella.
National Archives and Records Administration | Library and Archives Canada | Vatican Secret Archives | Anthology Film Archives | Sousa Archives and Center for American Music | The Atrocity Exhibition... Exhibit A | National Archives of Sweden | Archives of American Art | Video Archives | The Atrocity Archives | Northwest Digital Archives | National Archives of Scotland | National Archives of India | National Anthropological Archives | London Metropolitan Archives | International Council on Archives | Washington State Digital Archives | Stalin: The First In-depth Biography Based on Explosive New Documents from Russia's Secret Archives | Prussian Privy State Archives | Provincial Archives | Open Archives Initiative Protocol for Metadata Harvesting | Notman Photographic Archives | Neil Young Archives | National Archives of Norway | National Archives Building | Marquette University Special Collections and University Archives | Lu Rees Archives | Lithuanian Special Archives | Cover to ''The Action Heroes Archives'' Vol. 2 (2007), focusing on the Charlton Comics characters. Cover art by Steve Ditko. | California Ethnic and Multicultural Archives |
Where The Atrocity Archives was written in the idiom of Len Deighton and The Jennifer Morgue was a pastiche of Ian Fleming's James Bond novels, The Fuller Memorandum is a homage of sorts to Anthony Price's Dr David Audley/Colonel Jack Butler series of spy thrillers, and features two minor characters named Roskill and Panin, names which appeared as recurring characters in Price's series.
Where 2004's The Atrocity Archives is written in the idiom of Len Deighton, The Jennifer Morgue is a pastiche of Ian Fleming's James Bond novels and refers to the real-life Project Azorian (incorrectly named by the press as Project Jennifer); Stross also uses footnotes and narrative causality, two literary devices common in the novels of Terry Pratchett.