He was a Postdoctoral Fellow at the University of Texas at Austin (1980-1983) under the tutelage of Dr. Peter J. Rossky and then at Harvard University (1983-1985) under the tutelage of Nobel Laureate, Dr. Martin Karplus.
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Dr. Brooks co-authored "Proteins: A Theoretical Perspective of Dynamics, Structure, and Thermodynamics" (Wiley Interscience, 1988) with 2013 Nobel Laureate in Chemistry, Martin Karplus, and B. Montgomery Pettitt.