His attention was specially directed to the study of the igneous and metamorphic rocks in Alpine regions and in various parts of England (e.g.: the Lizard in Cornwall, at Salcombe and in the Charnwood Forest), Wales and the Scottish Highlands.
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In addition to many papers published in the Quarterly Journal of the Geological Society and Geological Magazine, he wrote several popular works on Alpine Regions, on English and Welsh scenery, as well as on theological subjects.
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In association with the names of glacial geologists grouped in this area, it was named by the UK Antarctic Place-Names Committee in 1971 after the Reverend Thomas George Bonney (1833–1923), English geologist who worked on the origin of cirques; he was Professor of Geology, University College London, 1877–1901.