Comparison of mtDNA cytochrome b and NADH dehydrogenase subunit 2 as well as nuclear β-fibrinogen intron 7 sequence data indicates that this is incorrect (Winker & Pruett, 2006).
In their mtDNA NADH dehydrogenase subunit 2 sequence, Chalinochromis are closer to J. dickfeldi, J. ornatus and J. transcriptus – in particular the latter two – than to any other living fish, while J. marlieri and J. regani are closer to Telmatochromis.
mtDNA cytochrome b and NADH dehydrogenase subunit 2 sequence data indicate that the dabbling and diving ducks are fairly distant from each other, the outward similarities being due to convergent evolution.
mtDNA NADH dehydrogenase subunits 2 and 3 and nDNA β-fibrinogen intron 7 sequence data puts it closer to (but still well distant from) the Streaked Bulbul (Ixos malaccensis).
In their mtDNA NADH dehydrogenase subunit 2 sequence, Chalinochromis are closer to J. dickfeldi, the Golden Julie (J. ornatus) and the Masked Julie (J. transcriptus) – in particular the latter two – than to any other living fish, while J. marlieri and the Convict Julie (J. regani) are closer to Telmatochromis.
There are 17 species of Patagioenas, which can be assigned to 4 groups based on mtDNA cytochrome b, cytochrome c oxidase subunit I, and NADH dehydrogenase subunit 2, as well as the nuclear β-fibrinogen intron 7 data combined with analyses of vocalizations and morphology.
Formerly placed in the family Formicariidae, they were reclassified to Conopophagidae following analysis of mtDNA cytochrome b and NADH dehydrogenase subunit 2 sequences (Rice, 2005a,b).
However, mtDNA sequence analyses of the cytochrome b and NADH dehydrogenase subunit 2 genes indicate that Tachyeres rather belongs into a distinct clade of aberrant South American dabbling ducks, which also includes the Brazilian, the Crested, and the Bronze-winged Ducks.
Protein subunit, a protein molecule that assembles with other protein molecules
mtDNA cytochrome b and NADH dehydrogenase subunit 2 sequence data (Voelker, 2002) is of limited use: the suspicion that there is a superspecies of probably 3 white-bellied, black-throated wagtails is confirmed.
protein | Protein subunit | subunit | Protein-protein interaction | Hfq protein | protein domain | Protein-protein_interaction | Protein Data Bank | RNA-binding protein | Promyelocytic leukemia protein | G protein | Wiskott–Aldrich syndrome protein | Protein G | protein dimer | Protein A | C-reactive protein | Bone morphogenetic protein 2 | AMP-activated protein kinase | Transmembrane protein | Tau protein | Sterol regulatory element-binding protein | SR protein | Rab escort protein | Protein structure | protein structure | Protein phosphatase 2 | protein kinase | Protein Information Resource | Protein folding | protein folding |
Analysis of mtDNA sequences of the cytochrome b and NADH dehydrogenase subunit 2 genes suggests that it belongs into a very distinct clade—possibly a subfamily of its own—together with the Blue-winged Goose, another African species of waterfowl with uncertain affinities.
Analysis of mtDNA sequences of the cytochrome b and NADH dehydrogenase subunit 2 genes, however, suggests that it is a quite basal member of the Anatidae, vindicating the earliest placement.
Recent cladistic analysis of mtDNA cytochrome b, cytochrome c oxidase subunit I and NADH dehydrogenase subunit 2, as well as nuclear β-fibrinogen intron 7 sequence data, combined with a distinct morphology and behaviour, suggest that the genus is valid but not monotypic.
However, mtDNA cytochrome b and NADH dehydrogenase subunit 2 sequence data suggests that the White Wagtail is itself polyphyletic or paraphyletic (i.e. the species is not itself a single coherent grouping).
mtDNA cytochrome b and ATP synthase subunit 6 sequence data confirms this arrangement and also suggests that the Mount Pinos birds are closer to P. a. gravirostris (Alexander & Burns, 2006).